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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847934.1_cds_XP_016510230.1_23091
CDS Infomation

[gene=LOC107827580] [db_xref=GeneID:107827580] [protein=ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like] [protein_id=XP_016510230.1] [location=join(43893..44177,44323..44424,46339..46392,47320..47379,47891..47987,48138..48211,48629..48682,48763..48846,48988..49083)] [gbkey=CDS]
Sequence

ATGGCCACCTACTTACGGTTGCCCATGGCGTCCTCAGTTCCATGTACTTCATCATCATCG
TCTCCGCTAAAACGGCGTAGTTTTAGCGTTCCCTGTGCAGCCAATAGCAATAGCAGTACA
AAGATTCCGATGCCTCCTCTAAACCCTAAGGACCCATTTCTAAATAAGCTTGCCTCTGTT
GCTGCAAATAATCCAGAAGCTCTCTACACTCGGCCTCAAAATTCGGACATGCCGCCTTTT
TTGGATATTTACGACTCCCCTAAGCTCATGGCTACTCCTGCTCAGGTGGAGAGATCAGTA
TCATACAATGAGCACAGACCGAGGAGACCTCCACCAGACTTACCCTCACTGTTGCTTCAT
GGTAGAATAGTTTATATTGGCATGCCGTTGGTGCCAGCAGTCACAGAGTTAGTTGNTATG
TTCCTAGTGGTGGCTGTTACTGTTGGTATGGAAACAGAAGGTTTTGCAATTTATGATGCC
ATGATGCAATTAAAAAACGAGATACACACTGTCGCAGTTGGTGCTGCCATCGGTCAAGCG
TGTCTCTTGCTTGCAGCTGGCAGTAAGGGCAAAAGGTTTATGATGCCACATGCCAAAGCC
ATGATTCAACAGCCCCGTGTGCCGTCATCTGGATTAATGCCGGCCAGCGACGTTTTCATC
CGAGCAAAGGAGGTAATCATAAACAGAGACACCCTTGTCAAGCTTTTGGCAAAACACACT
GAAAATTCTGAAGAAACTGTTGCCAATGTGATGAGAAGACCATTTTACATGGATGCTACC
AGAGCAAGGGAATTTGGCGTCATTGATAAGATTCTTTGGCGTGGGCAAGAGCAGATCATG
GCAGATGTTTCTGCACCAGAGCAGTGGGACAAGAATGCGGGGATCAAAGTTGCTGATGCT
ATTTAG

Peptide Sequence

PEP ID

XP_016510230.1
PEP Infomation

PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MATYLRLPMASSVPCTSSSSSPLKRRSFSVPCAANSNSSTKIPMPPLNPKDPFLNKLASV
AANNPEALYTRPQNSDMPPFLDIYDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLH
GRIVYIGMPLVPAVTELVXMFLVVAVTVGMETEGFAIYDAMMQLKNEIHTVAVGAAIGQA
CLLLAAGSKGKRFMMPHAKAMIQQPRVPSSGLMPASDVFIRAKEVIINRDTLVKLLAKHT
ENSEETVANVMRRPFYMDATRAREFGVIDKILWRGQEQIMADVSAPEQWDKNAGIKVADA
I

Transcript Sequence

Gene sequence data has not been registered.